PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY36730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 351aa MW: 38909.7 Da PI: 4.6402 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.6e-19 | 17 | 66 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d ++ r++lg+++taeeAa+a+++a+ l+g GAY36730.1 17 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTYDTAEEAARAYDEAACLLRG 66 789******.7*********33....35**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MEEAALSLCG GRRGRKRFVG VRQRPSGRWV AEIKDTIQKI RVWLGTYDTA EEAARAYDEA 60 ACLLRGANTR TNFWPCSLSS STRPPALPSR ITNLLLHRLK ARNSRNDQST ATSIDMTHDQ 120 EAANNLLEDT GQSADNYFNV TQESNRITSN DYCVIDGFDS SFNSSTSTSV HISTTGDNNW 180 STNKIGFDEN EGTNCKKEKI DFRFVDALGA ASACTYEYSP FEIAQEMMGS MEKEDGSSSS 240 EDEGDPTMQL IRETMKRMKY ERNFSASLYA FNGISECLKM KLGCSDNNDP LSTFTISNNY 300 EEDQDQKEKE NDVVVGTSLV STSIQTAAGS SSSTASSFSS TKEESLIRDV R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-13 | ERF family protein |