PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36674.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 346aa MW: 38192.8 Da PI: 6.9329

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	72.1	7.9e-23	17	59	1	43
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtl 43 kprl+WtpeLH+rFv+av++LGG++kAtPk+++++m+++gLtl GAY36674.1 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTL 59 79****************************************8 PP
2	Myb_DNA-binding	41.3	3.6e-13	19	59	1	37
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtl 37 r++WT+e+++++vdav+ lGg+ t+k+ +r mg g+tl GAY36674.1 19 RLKWTPELHQRFVDAVNHLGGPdkaTPKSLMRVMGiPGLTL 59 89**********************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGLQNQNMNL VLSTDAKPRL KWTPELHQRF VDAVNHLGGP DKATPKSLMR VMGIPGLTLL 60 GKSQHVEACI DNKQVVEYKE TQSSSDGHVN RNISDGTLNQ LNESLQIAQA LQVQMEVQRK 120 LHEQIEVQRH LQLRIEAQGK YLQSVLKKAQ ETLAGYSSSS AGVELAKAEL SQLVSMVSMG 180 CPSSSVSELT EAGTSSLKDF ERKQIRSTIC SMESSLTSSE SSGRKEEKQP VNEIGDTDTC 240 KSNKTTPELQ LMDIHIHPQD KPCKARSSNQ ASGRKRREST ISDGFPDEQQ TAKRLATQNE 300 KCDDQLRNTG LVGRFDLNSQ YQNESESGSK AIDLNCKGLD QLNGPL

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGLQNQNMNL VLSTDAKPRL KWTPELHQRF VDAVNHLGGP DKATPKSLMR VMGIPGLTLL  60
GKSQHVEACI DNKQVVEYKE TQSSSDGHVN RNISDGTLNQ LNESLQIAQA LQVQMEVQRK  120
LHEQIEVQRH LQLRIEAQGK YLQSVLKKAQ ETLAGYSSSS AGVELAKAEL SQLVSMVSMG  180
CPSSSVSELT EAGTSSLKDF ERKQIRSTIC SMESSLTSSE SSGRKEEKQP VNEIGDTDTC  240
KSNKTTPELQ LMDIHIHPQD KPCKARSSNQ ASGRKRREST ISDGFPDEQQ TAKRLATQNE  300
KCDDQLRNTG LVGRFDLNSQ YQNESESGSK AIDLNCKGLD QLNGPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	5e-71	G2-like family protein