PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36673.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 362aa MW: 40024.9 Da PI: 6.5173

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	72.2	7.7e-23	17	60	1	44
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtle 44 kprl+WtpeLH+rFv+av++LGG++kAtPk+++++m+++gLtl+ GAY36673.1 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLN 60 79****************************************85 PP
2	Myb_DNA-binding	42.7	1.3e-13	19	60	1	38
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlk 38 r++WT+e+++++vdav+ lGg+ t+k+ +r mg g+tl+ GAY36673.1 19 RLKWTPELHQRFVDAVNHLGGPdkaTPKSLMRVMGiPGLTLN 60 89*************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGLQNQNMNL VLSTDAKPRL KWTPELHQRF VDAVNHLGGP DKATPKSLMR VMGIPGLTLN 60 TDWGRANMWK PALIISKVTE IASDEADIHA FVEYKETQSS SDGHVNRNIS DGTLNQLNES 120 LQIAQALQVQ MEVQRKLHEQ IEVQRHLQLR IEAQGKYLQS VLKKAQETLA GYSSSSAGVE 180 LAKAELSQLV SMVSMGCPSS SVSELTEAGT SSLKDFERKQ IRSTICSMES SLTSSESSGR 240 KEEKQPVNEI GDTDTCKSNK TTPELQLMDI HIHPQDKPCK ARSSNQASGR KRRESTISDG 300 FPDEQQTAKR LATQNEKCDD QLRNTGLVGR FDLNSQYQNE SESGSKAIDL NCKGLDQLNG 360 PL

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGLQNQNMNL VLSTDAKPRL KWTPELHQRF VDAVNHLGGP DKATPKSLMR VMGIPGLTLN  60
TDWGRANMWK PALIISKVTE IASDEADIHA FVEYKETQSS SDGHVNRNIS DGTLNQLNES  120
LQIAQALQVQ MEVQRKLHEQ IEVQRHLQLR IEAQGKYLQS VLKKAQETLA GYSSSSAGVE  180
LAKAELSQLV SMVSMGCPSS SVSELTEAGT SSLKDFERKQ IRSTICSMES SLTSSESSGR  240
KEEKQPVNEI GDTDTCKSNK TTPELQLMDI HIHPQDKPCK ARSSNQASGR KRRESTISDG  300
FPDEQQTAKR LATQNEKCDD QLRNTGLVGR FDLNSQYQNE SESGSKAIDL NCKGLDQLNG  360
PL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	5e-70	G2-like family protein