PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36639.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 427aa MW: 48301.6 Da PI: 7.1094

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36639.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.5e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 l pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ GAY36639.1 14 LLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGNK 111 579*************************.89***********8888999***********************************95666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfykg+a kg ktdW+mhe+rl GAY36639.1 112 CIGLKKSLVFYKGKAAKGIKTDWMMHEFRL 141 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MDERNENDKL DEILLPGFRF HPTDEELVGF YLKRKIQQRP LSIELIKQLD IYKYDPWDLP 60 KLATTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGN KCIGLKKSLV 120 FYKGKAAKGI KTDWMMHEFR LPSLIDSVPP KRFMDKTIPA NDSWAICRIF KKTNSTAQRA 180 LSQSWVSPLP ETASSTDAHV KSSYNTQFSL TSSMAQYFNC NNDIQQQPSS SSSCLTNTST 240 NSTFSPFDFV PYKPINPVII SKPHHQLPNI SSGDLTSSFM FSPFEPTIPA AKCNINDVSS 300 VLLSMSSDSM LGDFGKASDQ CIDFVGSQDQ YSGFSTTALP HYEMQAAVTD ISNGDHHLHH 360 EDVLMKNQHM MNHVDDQWES TVRPIGFPFS LPMMSLAAET WKPSSLWDCS SCPREISTSV 420 STSKFML

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MDERNENDKL DEILLPGFRF HPTDEELVGF YLKRKIQQRP LSIELIKQLD IYKYDPWDLP  60
KLATTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGN KCIGLKKSLV  120
FYKGKAAKGI KTDWMMHEFR LPSLIDSVPP KRFMDKTIPA NDSWAICRIF KKTNSTAQRA  180
LSQSWVSPLP ETASSTDAHV KSSYNTQFSL TSSMAQYFNC NNDIQQQPSS SSSCLTNTST  240
NSTFSPFDFV PYKPINPVII SKPHHQLPNI SSGDLTSSFM FSPFEPTIPA AKCNINDVSS  300
VLLSMSSDSM LGDFGKASDQ CIDFVGSQDQ YSGFSTTALP HYEMQAAVTD ISNGDHHLHH  360
EDVLMKNQHM MNHVDDQWES TVRPIGFPFS LPMMSLAAET WKPSSLWDCS SCPREISTSV  420
STSKFML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-109	NAC family protein