PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY36605.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 293aa MW: 33181 Da PI: 6.4053 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.3 | 2.7e-18 | 80 | 133 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rqV +WFqNrRa++k GAY36605.1 80 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133 456899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130.1 | 8.9e-42 | 79 | 171 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy+ Lkr+y+a+k+++e+L++++++L++e+++ GAY36605.1 79 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMA 171 69**************************************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MSCNGMAFFP TNFMLQTPHE DEHQTPTSLN PILPSCAPQD FHGVASFLGK RSMSFSGIDA 60 GEEANGEDDF SDDGSQAGEK KRRLNMEQVK TLEKNFELGN KLEPERKMQL ARALGLQPRQ 120 VAIWFQNRRA RWKTKQLEKD YDLLKRQYEA VKADREALQA QNQKLHAEIM ALKSREVTES 180 INLNKETEGS CSNRSENSSD IKLDISRTPA IDSPMSTHPT SRNLFPTKST SSVRPTVAAQ 240 LFHNSSSSRP DLQCQKIEQN MQGTKDQESL SSMFCGMDDQ SGFWPWLEQH NFS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 128 | 136 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 1e-126 | HD-ZIP family protein |