PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36579.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 543aa MW: 59953.9 Da PI: 8.1565

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36579.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.2	9.7e-30	204	263	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r +ed +++++tYeg+Hnh+ GAY36579.1 204 MNDGCQWRKYGQKIAKGNPCPRAYYRCTISpTCPVRKQVQRWHEDMSILITTYEGTHNHP 263 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MEGQLLVVQP IITNRLETEE KLKSVKTKVG EIREENEKLK LSLSKMAKDY QSLQSHFLDI 60 LQQEEAQKSK DKISTHHDQE NEEVDELVLL SLGRTSAQPK KEEKKICNNL SDGHEKNDKE 120 GLALGLDCSR FEFSSNSRES ENRPSPANTT CEQLKEQEPT EIWSPSKINI KSKRSDDQDE 180 EVFQKAQLKK ARVSVRARCD TPTMNDGCQW RKYGQKIAKG NPCPRAYYRC TISPTCPVRK 240 QVQRWHEDMS ILITTYEGTH NHPLPISATA MASTTSAAAS MLQCRSSTSQ LGTSVSVSTP 300 PNLHGLNFIF SENARPHDQL NFSSSSISNT NAHPTIVLDL TAPATFSHFN RLSSSAPRYN 360 SSSTSLNFSS PFSTNSLQTS WSSGYSNNYE NYLGKQPAQE HIYKPYMQTM NNPRTPPPIP 420 QVQSLTESTI AATTKIITSN PNFQSALAAA ISSYIGQQNV GGPGESSSLD MKWGKPNFSI 480 KSAADSSAQN GTLGFASSLL DKYLPSSTHQ QPAVSIFPLN SPPFSASKTA LGSPVEVKDH 540 VKI

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MEGQLLVVQP IITNRLETEE KLKSVKTKVG EIREENEKLK LSLSKMAKDY QSLQSHFLDI  60
LQQEEAQKSK DKISTHHDQE NEEVDELVLL SLGRTSAQPK KEEKKICNNL SDGHEKNDKE  120
GLALGLDCSR FEFSSNSRES ENRPSPANTT CEQLKEQEPT EIWSPSKINI KSKRSDDQDE  180
EVFQKAQLKK ARVSVRARCD TPTMNDGCQW RKYGQKIAKG NPCPRAYYRC TISPTCPVRK  240
QVQRWHEDMS ILITTYEGTH NHPLPISATA MASTTSAAAS MLQCRSSTSQ LGTSVSVSTP  300
PNLHGLNFIF SENARPHDQL NFSSSSISNT NAHPTIVLDL TAPATFSHFN RLSSSAPRYN  360
SSSTSLNFSS PFSTNSLQTS WSSGYSNNYE NYLGKQPAQE HIYKPYMQTM NNPRTPPPIP  420
QVQSLTESTI AATTKIITSN PNFQSALAAA ISSYIGQQNV GGPGESSSLD MKWGKPNFSI  480
KSAADSSAQN GTLGFASSLL DKYLPSSTHQ QPAVSIFPLN SPPFSASKTA LGSPVEVKDH  540
VKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	3e-69	WRKY family protein