PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36499.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 310aa    MW: 33532.4 Da    PI: 10.2653
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36499.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.72.7e-1394138347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       GAY36499.1  94 PWTEDEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 138
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MSRSCSQCGN NGHNSRTCAE AGGGGSSGAG SEENGIMLFG VRVTEGSSSF RKSISMDNLS  60
QFDQPQDSNA DAGYASDDIV HASGRSRERK RGVPWTEDEH RLFLLGLQKV GKGDWRGISR  120
NFVKTRTPTQ VASHAQKYFL RRFNQNKRRR RSSLFDITAS STDTFMGSTM EEEQARQQET  180
ITVPLPQPQL NRHPGGFPVS AYPLKHSAVV LPVTGQKSME NLTIGPSNKP RTSPKLIRPI  240
PIHPVPPSSK LGGLNLNQKA THVDVDTLPL SLKLSTPSSS SDEQSAQTPH SSAAFQAMSS  300
GDSNSIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.21e-78MYB_related family protein