PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY36376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 217aa MW: 25414.7 Da PI: 7.9653 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.2 | 5.8e-16 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+++++ +G g+W++I + g++R++k+c++rw++yl GAY36376.1 9 KGLWTQEEDRILLEYIRVHGRGRWNRIHKVTGLKRCGKSCRLRWLNYL 56 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 57.7 | 2.7e-18 | 63 | 107 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g +T+eE+ l+++++ +lG++ W++Ia +++ gRt++q+k++w+++l GAY36376.1 63 GEFTEEEENLIIRLHDLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 107 78*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MKAENEYKKG LWTQEEDRIL LEYIRVHGRG RWNRIHKVTG LKRCGKSCRL RWLNYLSPNV 60 KHGEFTEEEE NLIIRLHDLL GNRWSLIAGR VPGRTDNQVK NHWNTHLCKK LGINKKQKKK 120 FVSSSKTQAQ TQSSRIIKDD NGLTHDNLNF EHLQDSEMAL DQEPGDRKKS NEEAESINHH 180 CNESLLLPTE DDFLNLCSPI LLEFLEGQPL DLMWHNN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 109 | 120 | KKLGINKKQKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 1e-60 | MYB family protein |