PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36363.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 473aa MW: 53138.3 Da PI: 6.6301

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.2e-12	287	334	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r+++ + Er+RR++++++++ Lr l+Pk + K++ a+iL A eYIk+L GAY36363.1 287 RAKNLITERNRRNKLKDGLFALRALVPKiS------KMDRAAILGDAAEYIKEL 334 6777899*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
TQKNKSSEER GDMRDLEKAV EWLRPFVDSK AWDYCVVWKL GDDPSSGGVG GGFEYVKVKE 60 ESGEEQKFSF CRDAHLKHSA RTKACEALAQ LPSFMDLYSG IHGEVVITNQ PKWISLANSS 120 DSIASHQSNS TRVLIPVFGG LIELFAAKHI SKDQNIIELV LAHCNTSIEQ RVVPAGSSYD 180 VGLDEKCLDI LLKENLQNFP SPLQLLTFVP GTQVLSAATR FNTHPYNEGS SRGSNPSIEH 240 PSFDSNYGYI AQNAPLMQPI GNSFAKRPKC KSHVFKEELG ERHRLGRAKN LITERNRRNK 300 LKDGLFALRA LVPKISKMDR AAILGDAAEY IKELLQEVDK LQDELKENED CEKDNEEMKS 360 FKLDEIHEGT STTYLPASEH NKSFPACGEK GKSEVRVEVN QINDRDFLIK LLCEHERGGF 420 VRLMEAINSL ELQVIDANVT TFNGKVLNIL RVQAHKENIR LKKLRETLIE LTG

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

TQKNKSSEER GDMRDLEKAV EWLRPFVDSK AWDYCVVWKL GDDPSSGGVG GGFEYVKVKE  60
ESGEEQKFSF CRDAHLKHSA RTKACEALAQ LPSFMDLYSG IHGEVVITNQ PKWISLANSS  120
DSIASHQSNS TRVLIPVFGG LIELFAAKHI SKDQNIIELV LAHCNTSIEQ RVVPAGSSYD  180
VGLDEKCLDI LLKENLQNFP SPLQLLTFVP GTQVLSAATR FNTHPYNEGS SRGSNPSIEH  240
PSFDSNYGYI AQNAPLMQPI GNSFAKRPKC KSHVFKEELG ERHRLGRAKN LITERNRRNK  300
LKDGLFALRA LVPKISKMDR AAILGDAAEY IKELLQEVDK LQDELKENED CEKDNEEMKS  360
FKLDEIHEGT STTYLPASEH NKSFPACGEK GKSEVRVEVN QINDRDFLIK LLCEHERGGF  420
VRLMEAINSL ELQVIDANVT TFNGKVLNIL RVQAHKENIR LKKLRETLIE LTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	6e-72	bHLH family protein