PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36361.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 483aa MW: 54349.7 Da PI: 6.6258

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.4e-12	297	344	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r+++ + Er+RR++++++++ Lr l+Pk + K++ a+iL A eYIk+L GAY36361.1 297 RAKNLITERNRRNKLKDGLFALRALVPKiS------KMDRAAILGDAAEYIKEL 344 6777899*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
TQKNKSSEER GDMRDLEKAV EWLRPFVDSK AWDYCVVWKL GDDPSRFIEW LGCCCSGGVG 60 GGFEYVKVKE ESGEEQKFSF CRDAHLKHSA RTKACEALAQ LPSFMDLYSG IHGEVVITNQ 120 PKWISLANSS DSIASHQSNS TRVLIPVFGG LIELFAAKHI SKDQNIIELV LAHCNTSIEQ 180 RVVPAGSSYD VGLDEKCLDI LLKENLQNFP SPLQLLTFVP GTQVLSAATR FNTHPYNEGS 240 SRGSNPSIEH PSFDSNYGYI AQNAPLMQPI GNSFAKRPKC KSHVFKEELG ERHRLGRAKN 300 LITERNRRNK LKDGLFALRA LVPKISKMDR AAILGDAAEY IKELLQEVDK LQDELKENED 360 CEKDNEEMKS FKLDEIHEGT STTYLPASEH NKSFPACGEK GKSEVRVEVN QINDRDFLIK 420 LLCEHERGGF VRLMEAINSL ELQVIDANVT TFNGKVLNIL RVQAHKENIR LKKLRETLIE 480 LTG

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

TQKNKSSEER GDMRDLEKAV EWLRPFVDSK AWDYCVVWKL GDDPSRFIEW LGCCCSGGVG  60
GGFEYVKVKE ESGEEQKFSF CRDAHLKHSA RTKACEALAQ LPSFMDLYSG IHGEVVITNQ  120
PKWISLANSS DSIASHQSNS TRVLIPVFGG LIELFAAKHI SKDQNIIELV LAHCNTSIEQ  180
RVVPAGSSYD VGLDEKCLDI LLKENLQNFP SPLQLLTFVP GTQVLSAATR FNTHPYNEGS  240
SRGSNPSIEH PSFDSNYGYI AQNAPLMQPI GNSFAKRPKC KSHVFKEELG ERHRLGRAKN  300
LITERNRRNK LKDGLFALRA LVPKISKMDR AAILGDAAEY IKELLQEVDK LQDELKENED  360
CEKDNEEMKS FKLDEIHEGT STTYLPASEH NKSFPACGEK GKSEVRVEVN QINDRDFLIK  420
LLCEHERGGF VRLMEAINSL ELQVIDANVT TFNGKVLNIL RVQAHKENIR LKKLRETLIE  480
LTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	8e-76	bHLH family protein