PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY36321.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | YABBY | ||||||||
Protein Properties | Length: 203aa MW: 23567.4 Da PI: 10.1007 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 108.3 | 1.4e-33 | 41 | 137 | 70 | 168 |
YABBY 70 elleelkveeenlksnvekeesastsvsseklsenedeevprvpp..virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPki 166 e +ee ++ee + +++ ++ s+s +s s+ne+e++ v + v++PPe+rqr+Psaynrfikeei+r+k++nP+++h+eafs+aaknWa P+i GAY36321.1 41 EPKEEFRKEEVQADQKAFNRFSPSILTS----SDNEEEDTGSVINhvVNKPPERRQRAPSAYNRFIKEEIRRLKTENPNMAHKEAFSTAAKNWAQCPPI 135 2223333333333333333333333333....4444444444433349*************************************************99 PP YABBY 167 hf 168 + GAY36321.1 136 QH 137 65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MLALRAVSSE VKNKHERRSH IMMKASFVPL HLLASFSHDD EPKEEFRKEE VQADQKAFNR 60 FSPSILTSSD NEEEDTGSVI NHVVNKPPER RQRAPSAYNR FIKEEIRRLK TENPNMAHKE 120 AFSTAAKNWA QCPPIQHKGD GESCGGQEEE KRAWNFEATD RVHVQGNGFR ERKAPRHSFR 180 ARKMLLEMRF EHFTSSSSRR VSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 1e-38 | YABBY family protein |