PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36010.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 342aa    MW: 37402.7 Da    PI: 4.6187
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.2e-1754102355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  GAY36010.1  54 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKG 102
                 56******.**********965...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MSSSTSKTLD KPFQGYDEQG QAQMGFALIQ RNPNSTSPSS EKRGRRKQPE PGRFLGVRRR  60
PWGRYAAEIR DPTTKERHWL GTFDTAHEAA LAYDRAALSM KGAQARTNFI YTDNGTFHSL  120
LTPFDIQALL PPPPQSSQFT VQNSTSAPPQ QLQPDISENN TTSKITITSN NETSTNETSY  180
GSSLDDTGFF FSEPDNSNSG YLGCIVPDSC LNPPSNHQAN SNSGASNDQK SFCSIMDTTS  240
TVLPTEPYMA GDFSYFGEFN DGFWDDRQQS WEMNELSSMI NNPIMAEDGC SMGALSDPAV  300
IDHHYHNPSH GIVPQATSSS SASSSSTPLF GGNVVDFGYS LF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.11e-51ERF family protein