PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY35827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 243aa MW: 27466 Da PI: 6.7105 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 112.9 | 3.5e-35 | 39 | 165 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 +GfrF+P++e ++ + L+kk + +++ ++ik++ di+++ePwdL +k+++e++ +yfF+k ky++++r++r t++gyWk tg+ ++++ ++ GAY35827.1 39 MGFRFQPSNEKII-CLLEKKRLNPHFSH-HTIKDIdDICSLEPWDLAgaSKTESEDRVCYFFCKPCYKYKESTRAHRRTNAGYWKVTGRGSKIKT-RNG 134 7************.78999999999888.77***999*********8533777788899***********************************9.888 PP NAM 99 lvglkktLvfy.kgrapkgektdWvmheyrl 128 l g+kk+L+fy +g a+k kt Wvmhey++ GAY35827.1 135 LSGIKKILTFYyHGPASKKAKTGWVMHEYHV 165 9********9978899999**********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MESHGGFRSL PTVEEVVTTL ILLCAALYSQ LKSEMESLMG FRFQPSNEKI ICLLEKKRLN 60 PHFSHHTIKD IDDICSLEPW DLAGASKTES EDRVCYFFCK PCYKYKESTR AHRRTNAGYW 120 KVTGRGSKIK TRNGLSGIKK ILTFYYHGPA SKKAKTGWVM HEYHVNDDPS YKDLLVDQIS 180 MKLRSDGGAS TYAEDSSDPN NIAYIDAWLD EPLEAGRAST LAEDSSDTNN TAYMDAWING 240 LLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 3e-29 | NAC family protein |