PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY35822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 252aa MW: 28244.9 Da PI: 8.7488 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.4e-20 | 83 | 131 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f t eAa+a+++a+k+++g GAY35822.1 83 VYRGIRQRP-WGKWAAEIRDPYK---GVRVWLGTFNT-AEAARAYDEAAKRIRG 131 69*******.**********865...4**********.*************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MCGGALIADY DEVRPVRRER KLTSEDLWSE FGSISDLLGL DYNGKSHPKQ PLKVKNEKAE 60 DLSNKAARVE GKEKKTQRVR KNVYRGIRQR PWGKWAAEIR DPYKGVRVWL GTFNTAEAAR 120 AYDEAAKRIR GDKAKLNFAQ PPPPIAPPPA KKRCMPSPEL TQPRFETIGT PPAPAPSPWV 180 GFGYQNEFYQ PRAVDDEFEL SQQISSLESF LGLEPLMSQP SGNGAGGYDS VDFWMLDDVA 240 GTQQLNSNQF LC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 4e-51 | ERF family protein |