PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35742.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CAMTA

Protein Properties

Length: 920aa MW: 103686 Da PI: 7.5059

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	154.9	1.8e-48	25	145	2	118
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpks...gsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++e k+rwl+++ei+aiL n + +++ +++ + pks g+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+ ptf r GAY35742.1 25 MEEaKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSnyrGTVVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVR 123 55669******************999666666543449******************************************************* PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le+ivlvhy+e++ GAY35742.1 124 RCYWLLDKTLENIVLVHYRETH 145 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 920 aa Download sequence
MAELLVGSEI HGFHTLKDLD VANMMEEAKT RWLRPNEIHA ILCNSKYFSI NAKPVNLPKS 60 NYRGTVVLFD RKMLRNFRKD GHNWKKKKDG KTVKEAHEHL KVGNEERIHV YYAHGEDSPT 120 FVRRCYWLLD KTLENIVLVH YRETHEGTPA TPPNSHSSSI SDQSAPLLLS EEFNSGAGHA 180 YSAGGKELQA PNESLTVQNH EMRLHELNTL EWDDLVVTND SNDSTEPRGD KFSHFDQQNH 240 TAIKGAASNG SFFPSHDSYA EVSSGGCLTS LSQPIDRSNN TQFNNLDGVY SELMGTQSSV 300 SSQRNEFGEV CTGDSLDILA GDGLQSQDSF GKWMNYIMTD SPGSVDDPVL EPSISSGHHQ 360 FTVPEHLFSI TDVSPAWAFS NEKTKILVTG FFHKDCLHLS KSNMFCVCGE VRVPAEFVQA 420 GVYRCFLPPH SPGLFLLYMS LDGHKPISQV LNFEYRSPQL HAPVASSEDK SKWEEFQVQM 480 RLAHLLFSSF KGLKILSSKV PPNSLKEAKK FASKSTCISN SWAYLFKSIG DKRTSLPEAK 540 DSFFELTLKS KLKEWLLERV VEGSKTTEYD VHGQGVIHLC AMLGYTWAIL LFSWSGLSLD 600 FRDKYGWTAL HWAAYYGREK MVVGLLSAGA KPNLVTDPTS ENPGGLNAAD VASKKGFDGL 660 AAFLSEQALV AQFNDMTLAG NISGSLQTGS TITVDTQNLT EDEVYLKDTL SAYRTAAEAA 720 ARIQAAFREH SLKVQTKAIR FSSPEEEAQN IIAALKIQHA FRNFEVRKKM AAAARIQHRF 780 RSWKVRKEFL NMRRQAIKIQ AAFRGFQVRK QYGKILWSVG VLEKAILRWR LKRKGFRGLQ 840 VDRVEVEAVS DPNHEGDAEE DFYRASRKQA EERVERSVVR VQSMFRSKKA QEEYRRMKLA 900 HDQAKLEYEG LLDPDMEMAD

Sequence ? help Back to Top

Protein Sequence Length: 920 aa Download sequence

MAELLVGSEI HGFHTLKDLD VANMMEEAKT RWLRPNEIHA ILCNSKYFSI NAKPVNLPKS  60
NYRGTVVLFD RKMLRNFRKD GHNWKKKKDG KTVKEAHEHL KVGNEERIHV YYAHGEDSPT  120
FVRRCYWLLD KTLENIVLVH YRETHEGTPA TPPNSHSSSI SDQSAPLLLS EEFNSGAGHA  180
YSAGGKELQA PNESLTVQNH EMRLHELNTL EWDDLVVTND SNDSTEPRGD KFSHFDQQNH  240
TAIKGAASNG SFFPSHDSYA EVSSGGCLTS LSQPIDRSNN TQFNNLDGVY SELMGTQSSV  300
SSQRNEFGEV CTGDSLDILA GDGLQSQDSF GKWMNYIMTD SPGSVDDPVL EPSISSGHHQ  360
FTVPEHLFSI TDVSPAWAFS NEKTKILVTG FFHKDCLHLS KSNMFCVCGE VRVPAEFVQA  420
GVYRCFLPPH SPGLFLLYMS LDGHKPISQV LNFEYRSPQL HAPVASSEDK SKWEEFQVQM  480
RLAHLLFSSF KGLKILSSKV PPNSLKEAKK FASKSTCISN SWAYLFKSIG DKRTSLPEAK  540
DSFFELTLKS KLKEWLLERV VEGSKTTEYD VHGQGVIHLC AMLGYTWAIL LFSWSGLSLD  600
FRDKYGWTAL HWAAYYGREK MVVGLLSAGA KPNLVTDPTS ENPGGLNAAD VASKKGFDGL  660
AAFLSEQALV AQFNDMTLAG NISGSLQTGS TITVDTQNLT EDEVYLKDTL SAYRTAAEAA  720
ARIQAAFREH SLKVQTKAIR FSSPEEEAQN IIAALKIQHA FRNFEVRKKM AAAARIQHRF  780
RSWKVRKEFL NMRRQAIKIQ AAFRGFQVRK QYGKILWSVG VLEKAILRWR LKRKGFRGLQ  840
VDRVEVEAVS DPNHEGDAEE DFYRASRKQA EERVERSVVR VQSMFRSKKA QEEYRRMKLA  900
HDQAKLEYEG LLDPDMEMAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein