PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35573.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CAMTA

Protein Properties

Length: 1015aa MW: 112637 Da PI: 7.662

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	173.5	3e-54	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e + rwl+++ei++iL n+ k++lt +++ rp+ gsl+L++rk +ryfrkDG+ w+kkkdgktv+E+hekLK g+++vl+cyYah+e+n++fqrr+yw GAY35573.1 20 QEaQYRWLRPTEICEILRNYLKFHLTPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSIDVLHCYYAHGEDNENFQRRSYW 118 55599******************************************************************************************** PP CG-1 101 lLeeelekivlvhylevk 118 +L+ +le+ivlvhy+evk GAY35573.1 119 MLDGQLEHIVLVHYREVK 136 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1015 aa Download sequence
MYGKLTPPRR IQRDLEQILQ EAQYRWLRPT EICEILRNYL KFHLTPDPPV RPPAGSLFLF 60 DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSIDVLH CYYAHGEDNE NFQRRSYWML 120 DGQLEHIVLV HYREVKEGYK SGRSAADPGS QIESSQTSSA RSLAQANSSA PAAQTSHASI 180 PNKIDWNGQA VSSEFEDVDS GHGSGTPSVT QSIYGSMSQN ASLVAASIAG LPELSRHPQW 240 FAGSKINHGS GSSMWPQIDN SSRNATSVLD QHQNFYVGQP SGADFITHKL TDARLASDST 300 IANIGTCGER LITDIDVHAV TTSSQGASQV LLEHNFNLIN NQYQNCPVPE VTVASVSQAG 360 IKPKEELGEL KKLDSFGRWM DQEIGGDCDD SLMASDSGNY WNTLDAENDD KEVSSLSHHM 420 QLEMDSLGPS LSQEQLFSIR DFSPDWAYSG AETKVLIIGM FLGTKKLSSD TKWGCMFGEI 480 EVPAEVLTDN VIRCQAPSHA AGRVPFYITG SNRLACSEVR EFEYREKPSK AGYPVASKIA 540 PEDEVRLQTR LAKFLYLDPE RKWFDCTIED CNKCKLKNTI YSMRGDSEKD WGRVDESPMA 600 IEGDCPNSRD KLIQNLLRNR LCEWLVWKIH EGGKGPNVID DGGQGVVHLA AALGYEWAMR 660 PIIAAGVSPN FRDARGRTAL HWASYVGREE TVITLVKLGA APGAVEDPTP AFPGGQTAAD 720 LASSRGHKGI AGYLAEADLS SHLSSLTVNE NGMDNVAAAL AAEKANETAA QIGVQSDGPA 780 AEQLSLRGSL AAVRKSAHAA ALIQQAFRVR SFRHRQSIQS SDDVSEVSVD LVALGSLNKV 840 SKMSHFEDYL HFAAIKIQQK YRGWKGRKDF LKMRNHIVKL QAHVRGHQVR KQYKKVVWSV 900 SIVEKAILRW RRRGSGLRGF RVGNSTANVA SENEKTDEYE FLRIGRKQKF AGVEKALERV 960 KSMVRNPEAR DQYMRMVAKF ENFKMCDDGS GLLSQGEDSL NGPTKDNLHA YVADQ

Sequence ? help Back to Top

Protein Sequence Length: 1015 aa Download sequence

MYGKLTPPRR IQRDLEQILQ EAQYRWLRPT EICEILRNYL KFHLTPDPPV RPPAGSLFLF  60
DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSIDVLH CYYAHGEDNE NFQRRSYWML  120
DGQLEHIVLV HYREVKEGYK SGRSAADPGS QIESSQTSSA RSLAQANSSA PAAQTSHASI  180
PNKIDWNGQA VSSEFEDVDS GHGSGTPSVT QSIYGSMSQN ASLVAASIAG LPELSRHPQW  240
FAGSKINHGS GSSMWPQIDN SSRNATSVLD QHQNFYVGQP SGADFITHKL TDARLASDST  300
IANIGTCGER LITDIDVHAV TTSSQGASQV LLEHNFNLIN NQYQNCPVPE VTVASVSQAG  360
IKPKEELGEL KKLDSFGRWM DQEIGGDCDD SLMASDSGNY WNTLDAENDD KEVSSLSHHM  420
QLEMDSLGPS LSQEQLFSIR DFSPDWAYSG AETKVLIIGM FLGTKKLSSD TKWGCMFGEI  480
EVPAEVLTDN VIRCQAPSHA AGRVPFYITG SNRLACSEVR EFEYREKPSK AGYPVASKIA  540
PEDEVRLQTR LAKFLYLDPE RKWFDCTIED CNKCKLKNTI YSMRGDSEKD WGRVDESPMA  600
IEGDCPNSRD KLIQNLLRNR LCEWLVWKIH EGGKGPNVID DGGQGVVHLA AALGYEWAMR  660
PIIAAGVSPN FRDARGRTAL HWASYVGREE TVITLVKLGA APGAVEDPTP AFPGGQTAAD  720
LASSRGHKGI AGYLAEADLS SHLSSLTVNE NGMDNVAAAL AAEKANETAA QIGVQSDGPA  780
AEQLSLRGSL AAVRKSAHAA ALIQQAFRVR SFRHRQSIQS SDDVSEVSVD LVALGSLNKV  840
SKMSHFEDYL HFAAIKIQQK YRGWKGRKDF LKMRNHIVKL QAHVRGHQVR KQYKKVVWSV  900
SIVEKAILRW RRRGSGLRGF RVGNSTANVA SENEKTDEYE FLRIGRKQKF AGVEKALERV  960
KSMVRNPEAR DQYMRMVAKF ENFKMCDDGS GLLSQGEDSL NGPTKDNLHA YVADQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein