PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY35417.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Trihelix
Protein Properties Length: 363aa    MW: 42242.5 Da    PI: 6.9647
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY35417.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix84.99.9e-27239323186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW++ e++aLi +r+ +e+++    +k  lWe++s+ mr+ g++rs k+Ckekwen+nk+++k  e+ kk+  e+s+tc+yf++le
  GAY35417.1 239 RWPEAEIQALIMLRTTLEHQFHGVGSKFSLWERISDGMRKMGYHRSGKKCKEKWENMNKYFRKSMENGKKH-LERSKTCQYFHDLE 323
                 8********************************************************************99.57778*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MEKRTGDRES EFPQQITPFP ESINQPPVIE SVNAPLQKLR PIRRSPADDP PSFEAAADKS  60
LKFGSGSVAE SLGPMSMWFD TEDESSSSSD SDIHVDLFTE IKEPGSQKRK RKTRVKIETF  120
LESLVMKIMD KQEQMNKQLI DMIAKRERER VIREEAWKQQ EMERMKRDEE IRAQETARSI  180
ALISFIQNFL GHEIQLPQPA PVSNVEENGS KDGRNHAENN ITQNANNRKW PEACDPNRRW  240
PEAEIQALIM LRTTLEHQFH GVGSKFSLWE RISDGMRKMG YHRSGKKCKE KWENMNKYFR  300
KSMENGKKHL ERSKTCQYFH DLEMYRNRLV NPGNVTNFPN FENFSESDAS NFTNQEIAAK  360
IED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.13e-54Trihelix family protein