PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35238.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 607aa MW: 65905.8 Da PI: 6.6575

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.8	1.4e-30	358	416	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ GAY35238.1 358 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 416 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MDKGWGLTLD SDHPIVSNLN FFTSNKPKPS LARFRTNRDM AASGAADSAS VRMFQLPASD 60 NSNAPSSSDD NRVAVDEVDF FSDDKNRVSI SDHREDDRNK TTNSVHIKKE NSHDQLRHRT 120 GLDVNTGLHL LTAANTGSDQ STVDDGVSSD HADKKRTKIE LTQLQVELQQ MNTENQRLRD 180 MLSQVTNNYN ALQMHIVALM QQQQENRRAP ESNQAHEVVE GKDEGKKHDD QVMVPRQFIG 240 LGPSAETDHE VSNCSSDEER TLSGTPPNNV EAASKEHVNS NGKNEIVSFD DQAAAAAENS 300 NGKRIGREES PESETQGWGP NNKVQKLSSA KGIDQSNEAT MRKARVSVRA RSEAPMITDG 360 CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DRTILITTYE GNHNHPLPPA 420 AMAMASTTTA AASMLLSGSM SSADGIMNPN LLARAILPCS SSMATISASA PFPTVTLDLT 480 HSPNPLQLQR QAAQFQVQFP GQPQNLASVT NTQLPQVFGQ ALYNQSKFSG LQLSQNIGSN 540 SQSGSHQTLP PPLQQPQQLA DTVSAATAAI TADPNFTAAL AAAITSIIGG AQNPFSNNSN 600 NNNRQHQ

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MDKGWGLTLD SDHPIVSNLN FFTSNKPKPS LARFRTNRDM AASGAADSAS VRMFQLPASD  60
NSNAPSSSDD NRVAVDEVDF FSDDKNRVSI SDHREDDRNK TTNSVHIKKE NSHDQLRHRT  120
GLDVNTGLHL LTAANTGSDQ STVDDGVSSD HADKKRTKIE LTQLQVELQQ MNTENQRLRD  180
MLSQVTNNYN ALQMHIVALM QQQQENRRAP ESNQAHEVVE GKDEGKKHDD QVMVPRQFIG  240
LGPSAETDHE VSNCSSDEER TLSGTPPNNV EAASKEHVNS NGKNEIVSFD DQAAAAAENS  300
NGKRIGREES PESETQGWGP NNKVQKLSSA KGIDQSNEAT MRKARVSVRA RSEAPMITDG  360
CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DRTILITTYE GNHNHPLPPA  420
AMAMASTTTA AASMLLSGSM SSADGIMNPN LLARAILPCS SSMATISASA PFPTVTLDLT  480
HSPNPLQLQR QAAQFQVQFP GQPQNLASVT NTQLPQVFGQ ALYNQSKFSG LQLSQNIGSN  540
SQSGSHQTLP PPLQQPQQLA DTVSAATAAI TADPNFTAAL AAAITSIIGG AQNPFSNNSN  600
NNNRQHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22070.1	1e-137	WRKY family protein