PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35219.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 338aa MW: 38211.4 Da PI: 10.2087

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35219.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.7e-32	74	127	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt +LH++Fv+a+e+LGG+e+AtPk +l++m+vkgLt++hvkSHLQ+YR+ GAY35219.1 74 PRLRWTADLHRSFVHAIERLGGEERATPKLVLQIMGVKGLTISHVKSHLQMYRS 127 8****************************************************6 PP
2	Myb_DNA-binding	48.4	2.2e-15	75	126	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+a+++lGg+ t+k++ + mg kg+t ++ks++q+y+ GAY35219.1 75 RLRWTADLHRSFVHAIERLGGEeraTPKLVLQIMGvKGLTISHVKSHLQMYR 126 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
GLINWPKEQR GREKLNNTAE RDKTNATESH KSYNSLFQVT VAIMKSVDSA ETSSCVNSSL 60 KSPSVRPYVR SKMPRLRWTA DLHRSFVHAI ERLGGEERAT PKLVLQIMGV KGLTISHVKS 120 HLQMYRSLKH EQMIQEAAKA TNKNDKVLEA PTTACQQDQH PTKCLSWRKN KNNTQKHQGF 180 GTQRYNEGLG HHLMNNANIP PAYWLVMMKG KHPIWINGRQ VMFNEPLSYG RVTKKQMERT 240 DNSFLLFNDQ LKNCATQQLQ ARKASASNQP EKVTPRGDSY LQRLEGFGHE SLQGTSYSIA 300 EVDVSLSLSL DTKTSAPWLK LGLADQNQND VSLDLTLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	9e-32	G2-like family protein