PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY35085.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 130aa MW: 14957.4 Da PI: 10.5459 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 101.8 | 9.6e-32 | 14 | 86 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +ekewyfF++rd+ky++g+r+nra+ sgyWkatg dk++ + + vg+kk Lvfy g+apkgekt+W+mheyrl GAY35085.1 14 GEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQ--PKPVGIKKALVFYAGKAPKGEKTNWIMHEYRL 86 689************************************98..789***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MIFIREISDL ALYGEKEWYF FTPRDRKYPN GSRPNRAAGS GYWKATGADK PIGQPKPVGI 60 KKALVFYAGK APKGEKTNWI MHEYRLADVD RSARKKNSLR VFYTIFILLY VRDKIDISLH 120 GALLRTCGQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 3e-61 | NAC family protein |