PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34737.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Trihelix

Protein Properties

Length: 309aa MW: 34784.6 Da PI: 6.8099

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.6	5.1e-16	33	123	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ + +L++a ++ +l+rg+l++++W++v++++ ++++ +r+ +qCk++++ ++k+yk +k++ + + + +s++p+f++++ GAY34737.1 33 CWSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVnalhaHSKKTHRTDVQCKNRIDTIKKKYKIEKARVVSSNGTLTSSWPFFERMD 123 7***************************************999***********************99998888999*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MGDLTESLTP STTTTTPTST TPYSRPLPVR EDCWSEEATS TLVDAWGRRY LELNRGNLRQ 60 KDWQDVADAV NALHAHSKKT HRTDVQCKNR IDTIKKKYKI EKARVVSSNG TLTSSWPFFE 120 RMDTLIGNNV KPSSNFSPKL SQSQSPPVAV PLAYRKSVSV NNSNINNINN NNNSNSLALA 180 PIPTATAVAL PQKRGYNSEG FYRNYSAVAA AAAAAESEDE EAEEEAEEEE NDNVNEENSG 240 VKRLAKAIER FGEVYERVEA EKLRQMVELE KQRMQFASDL EMQRLRMFTE MQVQLERNKR 300 TKRSGSNVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	1e-40	Trihelix family protein