PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34716.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 264aa    MW: 28804.7 Da    PI: 8.0321
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.5e-1275121354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN  +++Lr l+P++     +K++Ka+ L ++++ +k+L
  GAY34716.1  75 KNHSEAERRRRERINAHLDTLRGLVPPN-----GKMDKATLLAEVIRQVKEL 121
                 58************************99.....9************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MAAYSFDQNS PLGQGFGGFS KLYDPFLGGF NGANLRGGSI PQSLVLDSVR GELVKAPAKV  60
GKKEVSEAKA MVALKNHSEA ERRRRERINA HLDTLRGLVP PNGKMDKATL LAEVIRQVKE  120
LKTNAIEASK GFLIPTDADE VKVEPYNDEE AGDADFLYKA SICCEYRPEL MSDLRQALDA  180
LPLKMLKAEI STLGGRLKNV IVFTSCKEGN AEASQTLAND VQQALNSVLE KASPSPEYSP  240
RTTLPNKRQR ISFLDSSSSS SREL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18186ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-42bHLH family protein