PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34647.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 295aa    MW: 32723.3 Da    PI: 4.6347
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-18137187255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrd      k +r +lg+f++aeeAa a+++a+++++g
  GAY34647.1 137 HYRGVRRRP-WGKYAAEIRDS---SrKGARAWLGTFDSAEEAALAYDKAALRIRG 187
                 7********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MATQQNDHDA APESILENVW ANFIGSSEDG RIQRSGTSDA SEFSKSSSWE EMPSLDGSVE  60
ILERLPSLGR WISMGAEAWE ELLDGIIPTT KESYKCNTTG DDSKICRINS NTASSAEPGP  120
DKMNAMRVEK VATSTRHYRG VRRRPWGKYA AEIRDSSRKG ARAWLGTFDS AEEAALAYDK  180
AALRIRGPKA HLNFPLEEVA NNAMATEFSG AGFNNLSMMT ISQENDNISS SRNRKRTSRE  240
WEYQNIGATN YMMIDEPAIP IMRTASMESA LGHELDVLEF QDLGSEYLDS LLSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.19e-33ERF family protein