PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34616.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 317aa    MW: 35482.5 Da    PI: 7.7273
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.61.5e-33722121128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyW 83 
                 lp+G++F+Ptd+e++ e+L++kv +++      +++  +i++++    i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + +W
  GAY34616.1  72 LPAGVKFDPTDNEIL-EHLEAKVMSDSrklhplIDE--FIPTLEghngICYTHPEKLP-GVSKDGQIRHFFHRPSKAYTTGTRKRRKVHtdedgsETRW 166
                 799***********9.99****99999566433222..3443323334**********.555666777******************744446555788* PP

         NAM  84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 ++tgk+++v++ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  GAY34616.1 167 HKTGKTRAVFV-GGTVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 212
                 ***********.99************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MRWCNNKKID SSEDDEGAAA ANAIDQLTTS SATNSTSAVR STDDEIRTIT CPSCGHIIQF  60
QDQAGINDLP GLPAGVKFDP TDNEILEHLE AKVMSDSRKL HPLIDEFIPT LEGHNGICYT  120
HPEKLPGVSK DGQIRHFFHR PSKAYTTGTR KRRKVHTDED GSETRWHKTG KTRAVFVGGT  180
VKGFKKILVL YTNYGRQRKP EKTNWVMHQY HLGNNEEEKD GELVASKVFY QTQPRQCGSS  240
SINKDPSLEI SGHNSIHVPH KSSPPTFIEY YNQPYMTYDH GSMHTRESSP QLIPNLVVQG  300
DGSSFIRLAT DTSSKKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-118NAC family protein