PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34429.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 365aa MW: 40416.3 Da PI: 8.7381

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.9	9.8e-54	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ +++ GAY34429.1 15 LPPGFRFHPTDEELVVHYLKKKAASAPLPV-AIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSkGNQ 112 79**************************.88***********8888999*********************************9986778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg kt+W+mheyr+ GAY34429.1 113 KVGVKKALVFYGGKPPKGIKTNWIMHEYRI 142 8*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MESTDSSTSS QHPQLPPGFR FHPTDEELVV HYLKKKAASA PLPVAIIAEV DLYKFDPWEL 60 PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSKG NQKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RIVDNISGTK PPPHQLPADL ANKKHSLRLD DWVLCRIYKK 180 NNAQRPMERD RDEDSFEGMC VTLPPNQNPK PFPAPPGRST LSYGSIFEQD DHFFEGMLSS 240 AGEGIHQNSC VSSSKPPPNT MSMSLVSPTS NSIKRAIPPQ FWNEASGSMA SSPSRKSFLG 300 DLNSGSGTAT DHEHDHDNNS FVSLLNQLPQ SAQFNPNTSA LLGSLGDATA TLRQQFQLPA 360 MNWNS

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MESTDSSTSS QHPQLPPGFR FHPTDEELVV HYLKKKAASA PLPVAIIAEV DLYKFDPWEL  60
PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSKG NQKVGVKKAL  120
VFYGGKPPKG IKTNWIMHEY RIVDNISGTK PPPHQLPADL ANKKHSLRLD DWVLCRIYKK  180
NNAQRPMERD RDEDSFEGMC VTLPPNQNPK PFPAPPGRST LSYGSIFEQD DHFFEGMLSS  240
AGEGIHQNSC VSSSKPPPNT MSMSLVSPTS NSIKRAIPPQ FWNEASGSMA SSPSRKSFLG  300
DLNSGSGTAT DHEHDHDNNS FVSLLNQLPQ SAQFNPNTSA LLGSLGDATA TLRQQFQLPA  360
MNWNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	1e-112	NAC family protein