PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY34165.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 718aa MW: 79278.9 Da PI: 6.0036 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62 | 8.8e-20 | 59 | 114 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ +++t+ q++e+e++F+++++p+ ++r+eL+++lgL+ qVk+WFqN+R+++k GAY34165.1 59 RKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114 789999***********************************************998 PP | |||||||
2 | START | 227.5 | 3.8e-71 | 244 | 456 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS....SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECTT.... CS START 1 elaeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv...dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevissg.... 88 ela +a++e++++a+a++p+W+ + +n+de+l++f+++ + ++ea+r+s+vv+m++++lve+l+d++ qW+ + +a+t+ev+s+g GAY34165.1 244 ELAVAAMEEFLRMAQAGDPLWTDQV--LNEDEYLRTFPRGIGplgLRSEASRESTVVIMNHVNLVEILMDVN-QWSSVFCgivsRAMTIEVLSTGvagn 339 57899********************..************999******************************.******99999*************** PP ..EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHH CS START 89 ..galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrsl 184 galq+m+ae+q++splvp R+ +fvRy++q+++g+w++vdvS+d+ ++ p + +++++pSg+li++++ng+skv+wvehv++++r++h+++++l GAY34165.1 340 ynGALQVMTAEFQVPSPLVPtRENYFVRYCKQHSDGTWAVVDVSLDNLRPSP----ISKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHNIYKPL 434 **************************************************99....689999************************************* PP HHHHHHHHHHHHHHHTXXXXXX CS START 185 vksglaegaktwvatlqrqcek 206 v+sgla+gak+wvatl+rqce+ GAY34165.1 435 VNSGLAFGAKRWVATLDRQCER 456 ********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 718 aa Download sequence |
MFQPNTFESH HMFDMTRRSS ESDLGKLKED DYETKSGTET TEMEAPSGDD QDPSQHPKRK 60 RYHRHTQRQI QEMEAFFKEC PHPDDKQRKE LSRELGLEPL QVKFWFQNKR TQMKAQHERH 120 ENQILKAENE KLRAENNRYK EALGNATCPN CGGPAALGEM SFDEQHLRIE NARLREEIDR 180 ISGIAAKYVG KPLSSFPHLT PRSLDLGFTN LGTQSGFVGE MYGGCDLIRS ISGPSEADKP 240 MIVELAVAAM EEFLRMAQAG DPLWTDQVLN EDEYLRTFPR GIGPLGLRSE ASRESTVVIM 300 NHVNLVEILM DVNQWSSVFC GIVSRAMTIE VLSTGVAGNY NGALQVMTAE FQVPSPLVPT 360 RENYFVRYCK QHSDGTWAVV DVSLDNLRPS PISKCRRRPS GCLIQELPNG YSKVIWVEHV 420 EVDDRSVHNI YKPLVNSGLA FGAKRWVATL DRQCERLASS MANNIPAGDL CVITSPEGRK 480 SMLKLAERMV TSFCTGVGAS TAHAWTTLSA TGSDDVRVMT RKSMDDPGRP PGIVLSAATS 540 FWIPVPPRRI FDFLRDENSR SEWDILSNGG LVQEMAHIAN GRDPGNCVSL LRVNSANSSQ 600 SNMLVLQESC TDSTGSYVIY APVDIVAMNM VLSGGDPDYV ALLPSGFAIL PDGPGLNGGR 660 ILEVGSGGSL LTVAFQILVD SVPTAKLSLG SVATVNSLIK CTVERIKAAV MTDNASCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04890.1 | 0.0 | HD-ZIP family protein |