PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34045.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 275aa    MW: 30388.5 Da    PI: 4.7154
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34045.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.6e-193585155
         AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s++ GVr+++ +grWvAeI+d      k+ r++lg+f taeeAa+a+++a+  l+g
  GAY34045.1 35 SKFVGVRQRP-SGRWVAEIKDtT----KKIRVWLGTFETAEEAARAYDEAACLLRG 85
                79********.7*********33....36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEIQFQQQKQ LQKACINQVN RAGKFKGRNR TKSNSKFVGV RQRPSGRWVA EIKDTTKKIR  60
VWLGTFETAE EAARAYDEAA CLLRGSNTRT NFDTNVSFDS PLASRIRNLV NNKKGCQQQS  120
VEASATTTTT AYTPTSTATS NSSCTSSSGV MSGELSSSSS DIIQDAQLFD DAYKPDLSKC  180
IEDFELGSAQ IDHSWGSGNG VDQFSYTQEL LDLPENGALP ETTTDSEFAE FERMKVERQI  240
SASLYAINGV QEYMDTVHDA AEAFWDLPPL CSYAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-27ERF family protein