PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY33956.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NF-YA | ||||||||
Protein Properties | Length: 199aa MW: 22167.5 Da PI: 8.4342 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 52.2 | 2e-16 | 143 | 178 | 1 | 37 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkp 37 +ep++VNaKQy++Il+RRq+Rak+e+e+k+ ksrk GAY33956.1 143 EEPVFVNAKQYHGILRRRQSRAKAESENKV-LKSRKA 178 69****************************.777774 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MSLKLFATSL TSILLVVLPD LSCRFYMRDG LMTSSVHDMS DNSDADEQRK HPESQLQSST 60 PAMGMSHPSI TTPNVQYATH QVGAGHAMAP AAYPYPDPYY RSIFAPYDAQ PYPPQPYGGQ 120 PMVHLQLMGI QQAGVPLPTD AVEEPVFVNA KQYHGILRRR QSRAKAESEN KVLKSRKACY 180 KLQVLCPLFG LVFYLIGMF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 2e-32 | NF-YA family protein |