PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33857.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 311aa    MW: 35300.9 Da    PI: 5.5499
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.61.4e-05183226755
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ r RR+ri ++ +eL +l+P         +++ ae+ + A +Y++ Lq
  GAY33857.1 183 IAARERRRRITEKTQELGKLIPGgH------RMNTAEMFQAASKYVRFLQ 226
                 56799*****************955......9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MALSYCSNWE SLQQLNSDML SYSSNSGFHH HHQQPQQLQQ QAQVVLPQLL DETLFSFGNN  60
SGGCFEFSDT LLDPFLPPDE FFYGDSYTNL LPYFSSPSDA LISLSPEIFP PEDLESCQLP  120
KRQKSHHCDS NFAPNFFYGY VPNPPLMPEF LPEIPAPVTQ FQAPKPESSV KKPNGTSLSV  180
QSIAARERRR RITEKTQELG KLIPGGHRMN TAEMFQAASK YVRFLQAQVK VLQLIQPKQQ  240
QEMKEPFHMH AQDLQNLLAS PIIQEKLYSE DKCLVPKEFV ETLANDPEIQ SKPMVFQGID  300
QLLRTNIGGH S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.11e-31bHLH family protein