PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33845.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 498aa MW: 53812.8 Da PI: 6.3237

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33845.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.5	8.4e-31	254	312	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ GAY33845.1 254 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 312 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MCSFFGVEME NYQGDLTDII RAGGRQIGSN NSASVSASSS SASVVSASDH LNNPLPTWQF 60 PSDPLSFCSS IDDNRENLFG DPFSNTRDPL LHELNIPNSS GYYAPPPLPP ADRVVDHEAA 120 TAASNINIGR RHHHQRGLFH EDELKSPCNI FSRIQISPSS QSPKQQPAVS PCESPVIAAA 180 ASPRGIKTPV VVASDMINAN STSKSCLVDN TGPAQISSPR NLGIKRRKSQ AKKVVCIPAP 240 AAANSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM 300 LVITYTSEHN HPWPTQRNAL AGSTRSQPSK ANAAAKGSVS PSSHQPPQNT TTNNSNTKEN 360 VKESSNDTTT LSPSNNNFNA APSSSTSVKE EIEKPIDDDQ MEGADLDEFS EGFSSSHEIY 420 KPALPDSNQS HEDFFADLGE IEADPLNLLF SQGFSTGDHE NKGTRVLDPF NIFDWSGDNN 480 NNNSSSSNTS FGETKRGL

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MCSFFGVEME NYQGDLTDII RAGGRQIGSN NSASVSASSS SASVVSASDH LNNPLPTWQF  60
PSDPLSFCSS IDDNRENLFG DPFSNTRDPL LHELNIPNSS GYYAPPPLPP ADRVVDHEAA  120
TAASNINIGR RHHHQRGLFH EDELKSPCNI FSRIQISPSS QSPKQQPAVS PCESPVIAAA  180
ASPRGIKTPV VVASDMINAN STSKSCLVDN TGPAQISSPR NLGIKRRKSQ AKKVVCIPAP  240
AAANSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM  300
LVITYTSEHN HPWPTQRNAL AGSTRSQPSK ANAAAKGSVS PSSHQPPQNT TTNNSNTKEN  360
VKESSNDTTT LSPSNNNFNA APSSSTSVKE EIEKPIDDDQ MEGADLDEFS EGFSSSHEIY  420
KPALPDSNQS HEDFFADLGE IEADPLNLLF SQGFSTGDHE NKGTRVLDPF NIFDWSGDNN  480
NNNSSSSNTS FGETKRGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	2e-89	WRKY family protein