PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33702.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Trihelix
Protein Properties Length: 361aa    MW: 39495.2 Da    PI: 8.9031
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.95.4e-1822106276
    trihelix   2 WtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 
                 Wt  e+++Liea++ ++er  +++           ++ +W++v +++ ++g+ rs++qC++kw+nl ++yk++++ e+k  s ss
  GAY33702.1  22 WTVTETMVLIEAKQMDDERRMKRSsgessesrgkPAELRWKWVEDYCCRKGCLRSQNQCNDKWDNLMRDYKRVRDYERKLLSSSS 106
                 *************96555555321233444444499******************************************9855544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MADQGGDGGG GTGMREYRKG NWTVTETMVL IEAKQMDDER RMKRSSGESS ESRGKPAELR  60
WKWVEDYCCR KGCLRSQNQC NDKWDNLMRD YKRVRDYERK LLSSSSSPSD HGNIKAENVS  120
YWKMEKNERK EKNLPTNMLP QIYEALVEVV EKKGAGQRVI AGAGVGVSVA SGSHPHVGYM  180
VQPIVAAAPL PPMLQQQQHQ RSAPTTMLQP QPLPLPPLSL QPPPPQPQAA VPTVDSDTSE  240
YSDSPAKRRR RGGTEGGGSG DQQGTSAGAT ATASASTSQE LGTAISKSAS IIADALQSCE  300
EREERRHRDL VSLHERRLKI EESKTEINRE GINGLVDAIN KLANSILALA SSSKNQQSAS  360
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31310.12e-53Trihelix family protein