PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33478.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 415aa MW: 48129.6 Da PI: 5.4323

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	83.4	4.5e-26	9	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G++F P++e+lv +yL +k++g +++++e +k+vd+y++ ePwd+ k++ + + +++yfF++ +kk+ +g+r nr++ sg W+ + vl GAY33478.1 9 LPVGCKFLPSEEQLVRYYLFNKISGIPTPFAEYfVKDVDLYDYeEPWDIWKQFGGsnleDGEDLYFFTHLKKKSINGSRINRKVGSGAWQGEDAGELVL 107 799**********************9998877***9878753333223256688**********************999988888 PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++ +g kk++ + + ++p+ + W+mhey+l GAY33478.1 108 SCnSNRPIGSKKIFRYENDNSPH--NGCWIMHEYTL 141 7647778*****9666655..99*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MMQERSRILP VGCKFLPSEE QLVRYYLFNK ISGIPTPFAE YFVKDVDLYD YEEPWDIWKQ 60 FGGSNLEDGE DLYFFTHLKK KSINGSRINR KVGSGAWQGE DAGELVLSCN SNRPIGSKKI 120 FRYENDNSPH NGCWIMHEYT LNASLLPQNH HSSSDCVLCR LRKNGGQSVG IKDSRKKIKI 180 DKQVEDNDHQ PAGKSNSRKR VKFEHQVNDN DHPDEPFVEN RQNQYVQENQ SQPLNEQSPH 240 KLLESSVKNN PEEKPPVPRT KQTLLEQIEH LAENGYPSTF EENQQQPMTE PSLHNQLELS 300 QNHLLMEQTP SYLLKGQEEN HQLAVTEQNP HYLELSENHQ NMKRTSSSNL EENQLPATEQ 360 SHDDAIYSEL TDINSWVVHQ LTRILLMISF WFLMSLCIRI ENDSFSCMLD NPFSI

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MMQERSRILP VGCKFLPSEE QLVRYYLFNK ISGIPTPFAE YFVKDVDLYD YEEPWDIWKQ  60
FGGSNLEDGE DLYFFTHLKK KSINGSRINR KVGSGAWQGE DAGELVLSCN SNRPIGSKKI  120
FRYENDNSPH NGCWIMHEYT LNASLLPQNH HSSSDCVLCR LRKNGGQSVG IKDSRKKIKI  180
DKQVEDNDHQ PAGKSNSRKR VKFEHQVNDN DHPDEPFVEN RQNQYVQENQ SQPLNEQSPH  240
KLLESSVKNN PEEKPPVPRT KQTLLEQIEH LAENGYPSTF EENQQQPMTE PSLHNQLELS  300
QNHLLMEQTP SYLLKGQEEN HQLAVTEQNP HYLELSENHQ NMKRTSSSNL EENQLPATEQ  360
SHDDAIYSEL TDINSWVVHQ LTRILLMISF WFLMSLCIRI ENDSFSCMLD NPFSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	5e-21	NAC family protein