PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33472.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 407aa MW: 47244.1 Da PI: 5.4101

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33472.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	81.9	1.4e-25	9	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G++F P++e+lv++yL +k++g ++++ e +k+vd+y++ ePwd+ k++ + + +++yfF++ +kk+ +g+r nr++ sg W+ + vl GAY33472.1 9 LPVGCKFLPSEEQLVHYYLFNKISGIPTPFVEYfVKDVDLYDYeEPWDIWKQFGGpnleDGEDLYFFTNLKKKSINGSRINRKVGSGAWQGEDAGELVL 107 799**********************9988877***9878753333333356789**********************999999999 PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +++ +g kk++ + + + p+ + W+mhey+l GAY33472.1 108 SRnSNRPIGSKKIFRYENDNFPH--NRCWIMHEYTL 141 9856677*****9666666..899****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MMQERSRILP VGCKFLPSEE QLVHYYLFNK ISGIPTPFVE YFVKDVDLYD YEEPWDIWKQ 60 FGGPNLEDGE DLYFFTNLKK KSINGSRINR KVGSGAWQGE DAGELVLSRN SNRPIGSKKI 120 FRYENDNFPH NRCWIMHEYT LNASLLPQNH HSSSDCVLCR LRKNGGQSVG IKDSRKKIKN 180 DKQVQDNDHQ PAGKSNSRKR VKFEHQVNDN DQPDEPFVEN HQNQYVQENQ SQPLNERSPH 240 KLLESSVKNN PEEKPPVPRT KQTLLEQIEH LAENGYPSTF EENQQQPMTE PNLHNQLELS 300 QNHPLMEQTP SYLLKGQEEN HQLAVTEQNP HHLELSENHQ NMNHTSSSNL EENQLPATEQ 360 SHDDAIYSEL TDINSWVVHQ LTRIDDATYP HLADDKFLVS NELVYTD

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MMQERSRILP VGCKFLPSEE QLVHYYLFNK ISGIPTPFVE YFVKDVDLYD YEEPWDIWKQ  60
FGGPNLEDGE DLYFFTNLKK KSINGSRINR KVGSGAWQGE DAGELVLSRN SNRPIGSKKI  120
FRYENDNFPH NRCWIMHEYT LNASLLPQNH HSSSDCVLCR LRKNGGQSVG IKDSRKKIKN  180
DKQVQDNDHQ PAGKSNSRKR VKFEHQVNDN DQPDEPFVEN HQNQYVQENQ SQPLNERSPH  240
KLLESSVKNN PEEKPPVPRT KQTLLEQIEH LAENGYPSTF EENQQQPMTE PNLHNQLELS  300
QNHPLMEQTP SYLLKGQEEN HQLAVTEQNP HHLELSENHQ NMNHTSSSNL EENQLPATEQ  360
SHDDAIYSEL TDINSWVVHQ LTRIDDATYP HLADDKFLVS NELVYTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	7e-21	NAC family protein