PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33366.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 568aa MW: 64552.7 Da PI: 6.3479

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.2	5.4e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+k++g+++el e+i+evd+yk+ePw+Lp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s ++ GAY33366.1 6 LPPGFRFHPTDEELVAYYLKRKINGREIEL-EIIPEVDLYKCEPWELPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-QT 102 79**************************.99***********6434555777**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kktLv+y+grap+g +t+Wvmheyrl GAY33366.1 103 RSVGMKKTLVYYRGRAPHGIRTHWVMHEYRL 133 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEIIPE VDLYKCEPWE LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRSVGMKKT LVYYRGRAPH 120 GIRTHWVMHE YRLDERECET DSGLQDAYAL CRVFKKSAIG PKIVEHYAPT PITTANQMTH 180 HPNSPSIEYY SESSDYPIPY DRCLPSNIGT ESSNQTHDGK WTQFLSEDSF GLNNTTPFSN 240 YATTPYHPYK IDVALECAKL QHRLSLPPLE VEDFSHQIGV TDFKMHDHSH ALTQQELMIN 300 QSSGVQDPWG GNYSNATADD FSFMMTGDDN HYYDPSNNNN NGMTSVRYND KLWEGFNSRS 360 IEIGYLDEDV KSERMVENLR WVGMSNKDLD KNHLEEEIGD GTLASSPSFE VVEEIKVNHG 420 MFVSTRQAAD TFFHQIVPSQ IVQVQLNPAE VANNLSINAK AEKFTGTFMK PWKEIASAVV 480 CMLVLVIMHG FYYLGENLDN GKLNIDDRFN VKEKGCSSKK IKEGDLLVNI RGGRGDNFIV 540 CLKKIGLFLT ISLALCTMWA NHVVVSSA

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEIIPE VDLYKCEPWE LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRSVGMKKT LVYYRGRAPH  120
GIRTHWVMHE YRLDERECET DSGLQDAYAL CRVFKKSAIG PKIVEHYAPT PITTANQMTH  180
HPNSPSIEYY SESSDYPIPY DRCLPSNIGT ESSNQTHDGK WTQFLSEDSF GLNNTTPFSN  240
YATTPYHPYK IDVALECAKL QHRLSLPPLE VEDFSHQIGV TDFKMHDHSH ALTQQELMIN  300
QSSGVQDPWG GNYSNATADD FSFMMTGDDN HYYDPSNNNN NGMTSVRYND KLWEGFNSRS  360
IEIGYLDEDV KSERMVENLR WVGMSNKDLD KNHLEEEIGD GTLASSPSFE VVEEIKVNHG  420
MFVSTRQAAD TFFHQIVPSQ IVQVQLNPAE VANNLSINAK AEKFTGTFMK PWKEIASAVV  480
CMLVLVIMHG FYYLGENLDN GKLNIDDRFN VKEKGCSSKK IKEGDLLVNI RGGRGDNFIV  540
CLKKIGLFLT ISLALCTMWA NHVVVSSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-142	NAC family protein