PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33365.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 580aa MW: 65910.3 Da PI: 6.3489

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.1	5.6e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+k++g+++el e+i+evd+yk+ePw+Lp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s ++ GAY33365.1 6 LPPGFRFHPTDEELVAYYLKRKINGREIEL-EIIPEVDLYKCEPWELPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-QT 102 79**************************.99***********6434555777**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kktLv+y+grap+g +t+Wvmheyrl GAY33365.1 103 RSVGMKKTLVYYRGRAPHGIRTHWVMHEYRL 133 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEIIPE VDLYKCEPWE LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRSVGMKKT LVYYRGRAPH 120 GIRTHWVMHE YRLDERECET DSGLQDAYAL CRVFKKSAIG PKIVEHYAPT PITTANQMTH 180 HPNSPSIEYY SESSDYPIPY DRCLPSNIGT ESSNQTHDGK WTQFLSEDSF GLNNTTPFSN 240 YATTPYHPYK IDVALECAKL QHRLSLPPLE VEDFSHQIGV TDFKMHDHSH ALTQQELMIN 300 QSSGVQDPWG GNYSNATADD FSFMMTGDDN HYYDPSNNNN NGMTSVRYND KLWEGFNSRS 360 IEIGYLDEDV KSERMVENLR WVGMSNKDLD KSFVEEHKIV PIENISKEEI GDGTLASSPS 420 FEVVEEIKVN HGMFVSTRQA ADTFFHQIVP SQIVQVQLNP AEVANNLSIN AKAEKFTGTF 480 MKPWKEIASA VVCMLVLVIM HGFYYLGENL DNGKLNIDDR FNVKEKGCSS KKIKEGDLLV 540 NIRGGRGDNF IVCLKKIGLF LTISLALCTM WANHVVVSSA

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEIIPE VDLYKCEPWE LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRSVGMKKT LVYYRGRAPH  120
GIRTHWVMHE YRLDERECET DSGLQDAYAL CRVFKKSAIG PKIVEHYAPT PITTANQMTH  180
HPNSPSIEYY SESSDYPIPY DRCLPSNIGT ESSNQTHDGK WTQFLSEDSF GLNNTTPFSN  240
YATTPYHPYK IDVALECAKL QHRLSLPPLE VEDFSHQIGV TDFKMHDHSH ALTQQELMIN  300
QSSGVQDPWG GNYSNATADD FSFMMTGDDN HYYDPSNNNN NGMTSVRYND KLWEGFNSRS  360
IEIGYLDEDV KSERMVENLR WVGMSNKDLD KSFVEEHKIV PIENISKEEI GDGTLASSPS  420
FEVVEEIKVN HGMFVSTRQA ADTFFHQIVP SQIVQVQLNP AEVANNLSIN AKAEKFTGTF  480
MKPWKEIASA VVCMLVLVIM HGFYYLGENL DNGKLNIDDR FNVKEKGCSS KKIKEGDLLV  540
NIRGGRGDNF IVCLKKIGLF LTISLALCTM WANHVVVSSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-154	NAC family protein