PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY33318.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 257aa MW: 29334.1 Da PI: 7.1652 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.1 | 1.7e-19 | 89 | 141 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++t++qle Le+ F+++ +++ +++ +LA++lgL+ rq+ vWFqNrRa++k GAY33318.1 89 KKRLTSDQLESLERSFQEEIKLDPDRKMKLARELGLQPRQIAVWFQNRRARWK 141 4569************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 117.7 | 6.6e-38 | 87 | 179 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 e+k+rl+++q+++LE+sF+ee kL+p+rK++lareLglqprq+avWFqnrRAR+k+kqlE y++Lk++yda+++e+ +L++ev +L++ lke GAY33318.1 87 ERKKRLTSDQLESLERSFQEEIKLDPDRKMKLARELGLQPRQIAVWFQNRRARWKSKQLELLYDSLKQEYDAVSREKLKLQEEVMKLKRMLKE 179 69**************************************************************************************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MDWSSTTGNL RTFVPVIPRP ETSFDLLYNY NYDQFPGMDQ MNKHMHAAAA AAAMAEKSSS 60 SIGLIPAAEL MEKNIHHYGS SSTSSQERKK RLTSDQLESL ERSFQEEIKL DPDRKMKLAR 120 ELGLQPRQIA VWFQNRRARW KSKQLELLYD SLKQEYDAVS REKLKLQEEV MKLKRMLKEQ 180 GTSTRNMMNK QVSTGITEVS GEETVESTSV ATINGSFSNK HHQISECNYL FNVDEEFNAA 240 AAPLPSPFWG LLPTSFQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 88 | 117 | RKKRLTSDQLESLERSFQEEIKLDPDRKMK |
2 | 136 | 144 | RRARWKSKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 1e-50 | HD-ZIP family protein |