PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33314.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Trihelix

Protein Properties

Length: 414aa MW: 47213.4 Da PI: 9.3671

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	77.2	2.5e-24	128	224	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+++v++Li a+ +++++++++ +kk++W++vs++m ergf +sp+qC++k+++lnkryk+++e+ +k+ +++++++ ++++ ++ GAY33314.1 128 KWTDSMVKLLILAVLYIGDEVGSDGndkkktgallQKKGKWKSVSRAMLERGFYVSPQQCEDKFNDLNKRYKRVNEILGKGtACRVVENQSLLETMD 224 7************99999997534566888899******************************************559*****999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MEPNGLQGGL FSGIASGMLG LEMPLHPQSQ PQPQPQPQQQ NPQTNPQNPH HYPQMVAFSH 60 HPHDTELHHT QTQSQQSVKQ QHGYLFSSKQ KQQQLSPLSD EDELGLTPDD SAGDGKRKAS 120 SSPWQRMKWT DSMVKLLILA VLYIGDEVGS DGNDKKKTGA LLQKKGKWKS VSRAMLERGF 180 YVSPQQCEDK FNDLNKRYKR VNEILGKGTA CRVVENQSLL ETMDLTPKMK EEVKKLLNSK 240 HLFFKEMCAY HSTCHGSGTG GTPGANHSPE VATEPSVVQQ QQAQHRQGSL PVPVSPMVLQ 300 LRCEVSNVIQ DGAKTSWEKK QWMKMKLLQL EEQQISYQYQ AFELEKQRLK WVKFSSKKER 360 EMEKAKLVNE RRRLENESML LALRQKDYEL LDHQHHHQQQ HSSNKRSDPS SITG

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MEPNGLQGGL FSGIASGMLG LEMPLHPQSQ PQPQPQPQQQ NPQTNPQNPH HYPQMVAFSH  60
HPHDTELHHT QTQSQQSVKQ QHGYLFSSKQ KQQQLSPLSD EDELGLTPDD SAGDGKRKAS  120
SSPWQRMKWT DSMVKLLILA VLYIGDEVGS DGNDKKKTGA LLQKKGKWKS VSRAMLERGF  180
YVSPQQCEDK FNDLNKRYKR VNEILGKGTA CRVVENQSLL ETMDLTPKMK EEVKKLLNSK  240
HLFFKEMCAY HSTCHGSGTG GTPGANHSPE VATEPSVVQQ QQAQHRQGSL PVPVSPMVLQ  300
LRCEVSNVIQ DGAKTSWEKK QWMKMKLLQL EEQQISYQYQ AFELEKQRLK WVKFSSKKER  360
EMEKAKLVNE RRRLENESML LALRQKDYEL LDHQHHHQQQ HSSNKRSDPS SITG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	1e-86	Trihelix family protein