PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY33253.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 183aa MW: 20432 Da PI: 8.4779 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.7e-18 | 27 | 77 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 + ykGVr+ ++g+Wv+e+r+p +k+ r++lg+f ++++Aa+a++aa+++l+g+ GAY33253.1 27 PVYKGVRR--RNGKWVCELREP---NKKSRIWLGTFASPDKAARAYDAAALALRGN 77 68****85..47*********8...347*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MDNTAQKSST AQKRKAGRKK FQETRHPVYK GVRRRNGKWV CELREPNKKS RIWLGTFASP 60 DKAARAYDAA ALALRGNSAS LNFPEAAGAL RRAKSDDVRD IQCAAMEAAE KLSSPSSSKP 120 CMESNSENVQ DSRREFVDEE EVFNMPGIID GMAEALILTP PAMKSGFKWD DLDENVEFTL 180 WSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 1e-35 | ERF family protein |