PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33243.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

GRF

Protein Properties

Length: 439aa MW: 48283.8 Da PI: 9.4693

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.5	7.3e-26	185	228	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e GAY33243.1 185 DPEPGRCRRTDGKKWRCSRDVVAGHKYCERHMHRGRNRSRKHVE 228 79****************************************97 PP
2	QLQ	54.8	2.9e-19	113	149	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ aQ+q+L+ Q+l+y+y++a++ vPpeLlq+i+k GAY33243.1 113 SYFSLAQWQELELQALIYRYMLAGAVVPPELLQPIKK 149 79*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MPNNTPNKAY YNPKPKTKTT RLQINSSLSL SLSMELHLKQ WRDQQHESEQ QVSAAKIPKL 60 FLEPHEAQHL HQHQQPMSSG SSALPLFVPE PTSKVSSLSA FSDSTSRFPR MGSYFSLAQW 120 QELELQALIY RYMLAGAVVP PELLQPIKKS LVNSSPYFLH HPLQHYSHFQ PASLQSGYWG 180 RGAMDPEPGR CRRTDGKKWR CSRDVVAGHK YCERHMHRGR NRSRKHVEIP TPTSSAAART 240 TLKTTSSTVN NNNNNISAAT VAAPSPFAQM ANATTFALSA HSPSIDLLQF NQSSCVSKAV 300 KGLFEPQNEV GNRSDGHILR PFFDDWPRSL HDHNNCESNS SRVNSATCLS ISMPGNSSSS 360 DVSLKLSTGN IDEPGSQGGE REEPQLNWAA GWATHTVASM GGPLAEALRS STSNSNSSPT 420 SVLHQLPRSS ASEASYVST

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MPNNTPNKAY YNPKPKTKTT RLQINSSLSL SLSMELHLKQ WRDQQHESEQ QVSAAKIPKL  60
FLEPHEAQHL HQHQQPMSSG SSALPLFVPE PTSKVSSLSA FSDSTSRFPR MGSYFSLAQW  120
QELELQALIY RYMLAGAVVP PELLQPIKKS LVNSSPYFLH HPLQHYSHFQ PASLQSGYWG  180
RGAMDPEPGR CRRTDGKKWR CSRDVVAGHK YCERHMHRGR NRSRKHVEIP TPTSSAAART  240
TLKTTSSTVN NNNNNISAAT VAAPSPFAQM ANATTFALSA HSPSIDLLQF NQSSCVSKAV  300
KGLFEPQNEV GNRSDGHILR PFFDDWPRSL HDHNNCESNS SRVNSATCLS ISMPGNSSSS  360
DVSLKLSTGN IDEPGSQGGE REEPQLNWAA GWATHTVASM GGPLAEALRS STSNSNSSPT  420
SVLHQLPRSS ASEASYVST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	2e-71	GRF family protein