PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY32777.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 295aa    MW: 33283.2 Da    PI: 6.0391
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY32777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12213260355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++ ++Er+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  GAY32777.1 213 SKKQQNERKRRERINERLKILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 260
                 567899********************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MDSFGVLFAD GEWESFNKMF PTEEFDFTQQ FIAQAQQQQN DDEGLHFMTP SAFCPTSEAT  60
NVVSMAAGVN NESLFYSSYS TDHQLNSNLH NLSQDSNFGS NCSSSAFNNS SYFFSDISNN  120
HIPVTNAVCM SMVEEKIGLH DAPAFHDIAM EETSPINQCT AALVPAHDLQ LKRKLIDHGP  180
AEPDVNSSEN NGKKKPRVTR NVQKTTKKNP AKSKKQQNER KRRERINERL KILQNLVPNG  240
TKVDISTMLE EAVHYVKFLQ VQIKLLSSDE LWMYAPLAYN GIDYLCLNQK ISSLR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1219224ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.11e-27bHLH family protein