PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32592.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 367aa MW: 42158 Da PI: 7.2421

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32592.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.2	3.2e-32	197	251	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHe+Fve+v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR+ GAY32592.1 197 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRM 251 68****************************************************8 PP
2	Myb_DNA-binding	49.7	8.3e-16	201	250	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++e++v++v++lGg t+k+I + m +g+t ++ks++qky+ GAY32592.1 201 RWTQDLHEKFVECVNRLGGAdkaTPKAILKLMDsEGLTIFHVKSHLQKYR 250 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MNTQKLNFQE TFQKKHLDFG PPSQYFGDIH QQQPWMMRTT TQQHQNLDHA RSPSTILSRF 60 ESPASAFYAT ERYMGFCQYD SQAAGNNCSQ FSRTCDSSQQ FHLYQSPGEN FSVLSAEQAV 120 PLEIPWNFYK SPEASCINPL GKQYSGPFDE HQDHRVSNDG YGLTSLSQQG YASHQEKQSP 180 RFSSSSSFST GPVITNKTRI RWTQDLHEKF VECVNRLGGA DKATPKAILK LMDSEGLTIF 240 HVKSHLQKYR MAKYVPEFPE GKLEKRSSLN DLPQIDVKAT LQIKEALQLQ LDVQRRLHEQ 300 LEIQRKLQLR IEEQGKHLKM LFDQQQKASK DHSKPQNLEK VPEDDPPFNF EGIEFSTSEN 360 SGNSHFT

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MNTQKLNFQE TFQKKHLDFG PPSQYFGDIH QQQPWMMRTT TQQHQNLDHA RSPSTILSRF  60
ESPASAFYAT ERYMGFCQYD SQAAGNNCSQ FSRTCDSSQQ FHLYQSPGEN FSVLSAEQAV  120
PLEIPWNFYK SPEASCINPL GKQYSGPFDE HQDHRVSNDG YGLTSLSQQG YASHQEKQSP  180
RFSSSSSFST GPVITNKTRI RWTQDLHEKF VECVNRLGGA DKATPKAILK LMDSEGLTIF  240
HVKSHLQKYR MAKYVPEFPE GKLEKRSSLN DLPQIDVKAT LQIKEALQLQ LDVQRRLHEQ  300
LEIQRKLQLR IEEQGKHLKM LFDQQQKASK DHSKPQNLEK VPEDDPPFNF EGIEFSTSEN  360
SGNSHFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	1e-75	G2-like family protein