PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32589.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 236aa MW: 27032.7 Da PI: 9.7179

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.4	3.7e-29	137	191	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ Wt++LHe+Fve+v++LGGsekAtPk+il+lmk k L++ +vkSHLQkYR+ GAY32589.1 137 KKRITWTKDLHEHFVECVNRLGGSEKATPKAILKLMKSKELSILQVKSHLQKYRS 191 68****************************************************7 PP
2	Myb_DNA-binding	44.5	3.4e-14	141	190	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 WT++++e +v++v++lGg t+k+I + m k ++ q+ks++qky+ GAY32589.1 141 TWTKDLHEHFVECVNRLGGSekaTPKAILKLMKsKELSILQVKSHLQKYR 190 7***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MEAQSQEKQN LELGKMPSSI ISSYHLQELA SAFYLTDQCF FGFHQNQHKN NEVIEASLPP 60 SNQFSGDNFS KKLSELDTLE SLVLSSNRNS KFPRKNSSFP TPSESSQNTK NMSIFSSEEK 120 HSCGLISDSY RHILSNKKRI TWTKDLHEHF VECVNRLGGS EKATPKAILK LMKSKELSIL 180 QVKSHLQKYR SEKLISDQSL QGFPEKTMQM NLQKLIEDQG KQVKMMLEKQ LKSNQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	2e-28	G2-like family protein