PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY32430.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 27236.7 Da PI: 5.8254 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.9 | 1.8e-16 | 66 | 115 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr + +++Wv+e+r+p +k++r++lg++ ++e+Aa+a++ a+++l+g GAY32430.1 66 IFRGVRMRN-NNKWVCELREP---NKQTRIWLGTYPSPEMAARAHDVAALALRG 115 59****999.8*********8...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MDILFGQVSD PGLTDNKPES STQSDASSTA PPRRGAHSDE EVLLLATSRP KKRAGRRVFK 60 ETRHPIFRGV RMRNNNKWVC ELREPNKQTR IWLGTYPSPE MAARAHDVAA LALRGKSACL 120 NFADSVWRLP VPASTDAKDI RKAAAEAAEA FRPRDDELEE SNIHHVKLEE VQKTMQENTL 180 LPENVLYMDE HAVFDMPGLL ADMAEGLLLS PPPLHFGDDD VMKWDYHNNG ESDGCVSLWS 240 HSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 1e-59 | ERF family protein |