PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY32428.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 164aa    MW: 17710.8 Da    PI: 8.2381
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY32428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.22.6e-1568116255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r +    +Wv+e+r+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  GAY32428.1  68 LYRGIRCRN--SKWVSEVREPRK---STRIWLGTYPTPEMAAAAYDVAALALKG 116
                 69***9655..6*****999843...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MGDHDPQNPT NVSELDHYLQ LRGPHSLHNN TSTCQNYPSP VSENLAHPSS NTSTMAAAPS  60
SSTKKHPLYR GIRCRNSKWV SEVREPRKST RIWLGTYPTP EMAAAAYDVA ALALKGSDAV  120
LNFPNFVSTY PVPGSSSSVD IRNAAAAAAA LLLVEERPKV LSDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.19e-30ERF family protein