PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY32332.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 315aa    MW: 36141 Da    PI: 6.7933
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY32332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.21.4e-48241522128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kg 97 
                  pGfrFhPtdeelv +yL++kv++k+l++ e ik++diyk++PwdLpk  ++ ++e yfF+kr +ky+++ r+nr+t sg+Wkatg dk+v+s    ++
  GAY32332.1  24 LPGFRFHPTDEELVGFYLRRKVDKKPLSI-ELIKQIDIYKHDPWDLPKISSTPDNEGYFFCKRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSDggeGQ 121
                 59***************************.89***************777778899*************************************966555 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                   +glkktLv+y+g+a kg+ktdW+m+e+rl
  GAY32332.1 122 DCIGLKKTLVYYRGTAGKGTKTDWMMNEFRL 152
                 55***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MNGQNIKIDH HCYRDDHEAD DHQLPGFRFH PTDEELVGFY LRRKVDKKPL SIELIKQIDI  60
YKHDPWDLPK ISSTPDNEGY FFCKRGRKYR NSVRPNRVTG SGFWKATGID KPVYSDGGEG  120
QDCIGLKKTL VYYRGTAGKG TKTDWMMNEF RLPSDDRSGN TNVTNAKTTL PEAEVWTICR  180
VFKRNVSSRK YTNWKEQSSA RRQSSVTELP SATITYSTES NNQEEAYISF ENPGIHRHTD  240
NLKPTAVHQI NEISQFSSVE QLSGNIPSNP YESMASSSSH PHANGNDFHE LFTQENWDEL  300
RSVVEFALEC PNFSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.19e-89NAC family protein