PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32152.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 566aa MW: 62490.1 Da PI: 6.7421

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.1	3.7e-33	222	279	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsY++Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k GAY32152.1 222 EDGYNWRKYGQKQVKGSENPRSYFKCTFPDCPMKKKVERSL-DGQITEIVYKGSHNHPK 279 7**************************************.*************85 PP
2	WRKY	105.6	2.5e-33	390	448	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ GAY32152.1 390 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTTGCPVRKHVERASHDMRAVITTYEGKHNHD 448 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MASSSFFMNN SMDSFSQNRT TTTANTTSSS STITSSWGFT NYTNSDHQIG LEIPKFKSLS 60 PSSLPLSPPP VSPSSFLSIP PSGFSPGALL DSPVLFSNIL ASPTTEAFNW ISNQQNISKM 120 EENNYFDFSF QTQTRPSSNS VSVQEESVKR QQEPWNFNKP TKESDFSTEN PGVKSEFAPM 180 ESFSSDMASY QTNVQSNAAP QSGNYGHYNQ SSAYTREQKR SEDGYNWRKY GQKQVKGSEN 240 PRSYFKCTFP DCPMKKKVER SLDGQITEIV YKGSHNHPKP TSTRRSSSSQ SMQHSTCANS 300 DLSDQSVGPL GNTHTDSFSM QNESSTSFGE DDFVEQGSPT SNPIGDDDEN EPDAKRWKGE 360 NDIEGVIGTG SRTVREPRIV VQTTSDIDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTTTG 420 CPVRKHVERA SHDMRAVITT YEGKHNHDVP AARGSGYTLT RPLPNTNTGN VPVPIRPSVT 480 AMASHSNLSN YSNSLNNTRF PSSSGSQAPY TAAMLQSTGS YGISGFAKPT GSYMMNQTQQ 540 SDGLFNRAKD EPRDDLFLES FLNSNS

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MASSSFFMNN SMDSFSQNRT TTTANTTSSS STITSSWGFT NYTNSDHQIG LEIPKFKSLS  60
PSSLPLSPPP VSPSSFLSIP PSGFSPGALL DSPVLFSNIL ASPTTEAFNW ISNQQNISKM  120
EENNYFDFSF QTQTRPSSNS VSVQEESVKR QQEPWNFNKP TKESDFSTEN PGVKSEFAPM  180
ESFSSDMASY QTNVQSNAAP QSGNYGHYNQ SSAYTREQKR SEDGYNWRKY GQKQVKGSEN  240
PRSYFKCTFP DCPMKKKVER SLDGQITEIV YKGSHNHPKP TSTRRSSSSQ SMQHSTCANS  300
DLSDQSVGPL GNTHTDSFSM QNESSTSFGE DDFVEQGSPT SNPIGDDDEN EPDAKRWKGE  360
NDIEGVIGTG SRTVREPRIV VQTTSDIDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTTTG  420
CPVRKHVERA SHDMRAVITT YEGKHNHDVP AARGSGYTLT RPLPNTNTGN VPVPIRPSVT  480
AMASHSNLSN YSNSLNNTRF PSSSGSQAPY TAAMLQSTGS YGISGFAKPT GSYMMNQTQQ  540
SDGLFNRAKD EPRDDLFLES FLNSNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-110	WRKY family protein