PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028127402.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CPP

Protein Properties

Length: 457aa MW: 50887.7 Da PI: 8.3296

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028127402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.6	2.9e-14	71	110	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 e+k+C+Ck+s+Clk+YCeCfa+g++C+ C+C +C+N+ e+ XP_028127402.1 71 EQKRCKCKQSRCLKLYCECFASGTYCNG-CSCINCQNNVEN 110 79************************.******9875 PP
2	TCR	46.2	9.1e-15	156	193	2	39
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++kgC+Ckks Clk+YCeCf+a+ Cse+CkC +CkN XP_028127402.1 156 KHKGCHCKKSGCLKRYCECFQAKILCSENCKCVGCKNF 193 579**********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MEREAEKPGF PPKKLARQLD FANQNGLSLK VAPLEKSKSQ RKSKTELNLP PCRSPHSPLP 60 EMELIDGATK EQKRCKCKQS RCLKLYCECF ASGTYCNGCS CINCQNNVEN EAAREIAMES 120 TLERNPNAFK PKIIANSPHR TNDNEDEAKS TLPVVKHKGC HCKKSGCLKR YCECFQAKIL 180 CSENCKCVGC KNFRKCEERL ALSNGSNTKS TAFIKQTNSA ITDAVGFSGY RFSQKPRKRK 240 YLDSFLGSNR EGPPICRFTQ DQQVVGSAAL ASSKIIYRSL LAGTIQQQDM RELCSALVLV 300 SQTAKILADQ NGSVNVQTVR ENETASSLAN RDGETCLKTP EIQNVMPNDY LVRDQENKTS 360 NGDTHSGDAE IHKGVPMSPR TLSLLCDEKD MSFMPDDSSD QIKNHVSNTD VYAEQESLVL 420 VKFQNCLNRL ITRGNMKETE CFLSAKAETK NNESVNN

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MEREAEKPGF PPKKLARQLD FANQNGLSLK VAPLEKSKSQ RKSKTELNLP PCRSPHSPLP  60
EMELIDGATK EQKRCKCKQS RCLKLYCECF ASGTYCNGCS CINCQNNVEN EAAREIAMES  120
TLERNPNAFK PKIIANSPHR TNDNEDEAKS TLPVVKHKGC HCKKSGCLKR YCECFQAKIL  180
CSENCKCVGC KNFRKCEERL ALSNGSNTKS TAFIKQTNSA ITDAVGFSGY RFSQKPRKRK  240
YLDSFLGSNR EGPPICRFTQ DQQVVGSAAL ASSKIIYRSL LAGTIQQQDM RELCSALVLV  300
SQTAKILADQ NGSVNVQTVR ENETASSLAN RDGETCLKTP EIQNVMPNDY LVRDQENKTS  360
NGDTHSGDAE IHKGVPMSPR TLSLLCDEKD MSFMPDDSSD QIKNHVSNTD VYAEQESLVL  420
VKFQNCLNRL ITRGNMKETE CFLSAKAETK NNESVNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	2e-93	CPP family protein