PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028127360.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 320aa MW: 35075.3 Da PI: 8.8922

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028127360.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.4	3.3e-29	160	219	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed++v++ tYegeHnh+ XP_028127360.1 160 VKDGYQWRKYGQKVTRDNPSPRAYFKCAFApSCPVKKKVQRSIEDQSVLVATYEGEHNHP 219 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MEYFSLVDTS LDLNANPLRH IDEVPDNKEI QSTFLELGRK ISAKEENRAL MEELNRVSAE 60 NKKLTGMLTV LCENYNALRS QLMDYVSKNP VVEQVVVGKK RKADSTATAT ANGGGANGGG 120 NSESSSSDED SCKKTKGEHV KAKISRVYVR TEANDTSLIV KDGYQWRKYG QKVTRDNPSP 180 RAYFKCAFAP SCPVKKKVQR SIEDQSVLVA TYEGEHNHPH PSRVESTPSS NRCVTLGGSA 240 APFPASLSSS FPGPTITLDL TKSKPNPDSK NSNQAMNSPE FQQFFVEQMA SSLTKDPSFK 300 AALAAAISGR FLQQNQTEKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	136	KKRKADSTATATANGGGANGGGNSESSSSDEDSCKKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	2e-94	WRKY family protein