PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028127188.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 596aa MW: 66011.8 Da PI: 6.8951

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028127188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.7	1.1e-09	408	445	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + XP_028127188.1 408 FEHflHPYPTDTDKIMLAKQTGLSRSQVSNWFINARVR 445 554459******************************88 PP
2	BELL	102.3	3.6e-33	280	348	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e +kkk++L+s+l+eV++rYk y++q+q+v++sFe vagl +a+pY++lAlka+S+hFr+Lk+ai++q+ XP_028127188.1 280 EQRKKKSRLISMLNEVYRRYKYYYQQMQAVVASFESVAGLSNAAPYANLALKAMSKHFRSLKNAITDQL 348 7899**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MADGFEPYHV PQQSRRDKLR VVVQTDPSGC AGLLPLYDPS LFPSDLLSCA NLHHHQNNHN 60 PLLDEPTKPN PTHNSTVKRE GVNLMGYVGS SSSTSQQQQQ HIYMDPQSSL HMNPSSIHDI 120 SNNPFLFTPQ NLRVYDQSFN GDEVVVYKPE PLSLSLSSHQ THQSTLPLEL NPQRYESSIF 180 TDKVSGGVYV VPSIVGGGGG GGSGANDLSR SSVPLGPFTG YGSILKGSRF LKPAQQLLEE 240 ICDVGLGIYA EKITEDSGLM DAPVENLGGS GVVEESVSGE QRKKKSRLIS MLNEVYRRYK 300 YYYQQMQAVV ASFESVAGLS NAAPYANLAL KAMSKHFRSL KNAITDQLQF TNKDQNDPKD 360 ETPRLGIPDA LYSQRPVHNL GFLENQPVWR PQRGLPERAV NVLRAWLFEH FLHPYPTDTD 420 KIMLAKQTGL SRSQVSNWFI NARVRLWKPM VEEIHMLETR QTQKSMQRDD QNVDRPSDPS 480 DHLPPGTSLA SENPSTSTKR TRNDFPNKSM GTEEPMSLSY GNLSRHHGGG GVSLTLGLHQ 540 NNGIGLSEPT FPLNAARRFG LDPNSEGYVM GGSFEAQNRQ FGRDVIGGQF LHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MADGFEPYHV PQQSRRDKLR VVVQTDPSGC AGLLPLYDPS LFPSDLLSCA NLHHHQNNHN  60
PLLDEPTKPN PTHNSTVKRE GVNLMGYVGS SSSTSQQQQQ HIYMDPQSSL HMNPSSIHDI  120
SNNPFLFTPQ NLRVYDQSFN GDEVVVYKPE PLSLSLSSHQ THQSTLPLEL NPQRYESSIF  180
TDKVSGGVYV VPSIVGGGGG GGSGANDLSR SSVPLGPFTG YGSILKGSRF LKPAQQLLEE  240
ICDVGLGIYA EKITEDSGLM DAPVENLGGS GVVEESVSGE QRKKKSRLIS MLNEVYRRYK  300
YYYQQMQAVV ASFESVAGLS NAAPYANLAL KAMSKHFRSL KNAITDQLQF TNKDQNDPKD  360
ETPRLGIPDA LYSQRPVHNL GFLENQPVWR PQRGLPERAV NVLRAWLFEH FLHPYPTDTD  420
KIMLAKQTGL SRSQVSNWFI NARVRLWKPM VEEIHMLETR QTQKSMQRDD QNVDRPSDPS  480
DHLPPGTSLA SENPSTSTKR TRNDFPNKSM GTEEPMSLSY GNLSRHHGGG GVSLTLGLHQ  540
NNGIGLSEPT FPLNAARRFG LDPNSEGYVM GGSFEAQNRQ FGRDVIGGQF LHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-106	TALE family protein