PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028127178.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 320aa    MW: 35923.1 Da    PI: 8.6426
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028127178.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.2e-19173223255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta +Aaka+++a+ k++g
  XP_028127178.1 173 HYRGVRQRR-WGKFAAEIRDPKRRG--SRVWLGTFDTAIDAAKAYDRAAFKMRG 223
                     7*****998.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MATPVEISTL ELIEQHLLGD FSPVDSYDIN SLSDTSSIFT AFDSATSVQT EGSSSQSYSF  60
CSQTLSSDST IAISDYLDSN QVNNTRNFDF VHNSINFEQN QFNYFGFESK PQIIDLTTPK  120
PVNLNTQTSS RSSFSERKPS LKIDLAPVKK LEWLDFRQPT KPAVSEEKPF SRHYRGVRQR  180
RWGKFAAEIR DPKRRGSRVW LGTFDTAIDA AKAYDRAAFK MRGSKAILNF PLQVGNWRHS  240
SSAGTKRRRE VKEQTEERSV KKERLPESEA SVVSSAASCS LTPSSWTALW HQNADGIFDA  300
ALLSPLSLHP LLGYSQVMVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.19e-35ERF family protein